Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATTGTAGTGTTTGCCAGGA
.(((((((((((((((......&)))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270894
GeneSymbolTRAPPC3
Binding site1129,1150
Score0.846
Seed1
Au0.5
Energy-20.4
Binding len21
Me-3.793
Phylopstem5.348476249999999
Phylopflank4.661228496250001
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end2
Position3UTR
2D Structure