Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTATAACCTGTTTCCATTCTCCATTCAAATAAAGAGCAGACTGCGAT
((((((((((((((((((((.&))))))))))...........................)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270896
GeneSymbolTRAPPC3
Binding site1007,1056
Score0.846
Seed1
Au0.603
Energy-22.2
Binding len49
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings39
Pairings in 3prime end7
Position3UTR
2D Structure