Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGGATGTTATATATTCTTATAACCTGTTTCCATTCTCCATTCAAATAAAGAGCAGACTGCGAT
((((((((((((((((((((.&.))))))))))...........................)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270897
GeneSymbolTRAPPC3
Binding site547,613
Score0.904
Seed1
Au0.603
Energy-22.2
Binding len50
Me-3.938
Phylopstem0.9462097937500001
Phylopflank1.7060728025
Longest consecutive pairings10
Position of longest consecutive pairings39
Pairings in 3prime end7
Position3UTR
2D Structure