Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAAGGTGCCAGGTT
(((((((((....(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001363729
GeneSymbolSAMHD1
Binding site2492,2509
Score0.846
Seed1
Au0.412
Energy-20.4
Binding len17
Me-12.641
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure