Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTACTGTATGAAAGAAGGTG
((((..((((((..((((((((&)))))))))))))).....)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270941
GeneSymbolJAKMIP2
Binding site2267,2291
Score0.846
Seed0
Au0.588
Energy-16.9
Binding len24
Me-12.104
Phylopstem0.7195171250000001
Phylopflank0.29664365012499994
Longest consecutive pairings14
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure