Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCAAAAGCTAAGAACTACCCTGTAGCCAGGA
.((((((.((((..((((.(((&.))).))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270941
GeneSymbolJAKMIP2
Binding site2991,3025
Score0.846
Seed1
Au0.603
Energy-19.3
Binding len22
Me-8.253
Phylopstem0.030818866666666667
Phylopflank-0.16056492999999994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure