Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGTTACATGTAACGCAGCTGTAC
.((((((((((..(((((.(.&).))))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363729
GeneSymbolSAMHD1
Binding site3907,3930
Score0.923
Seed1
Au0.676
Energy-21.5
Binding len23
Me-8.429
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure