Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGCAAGTGAGCTGCGGG
((((((((.((.((((..(((&)))...)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270966
GeneSymbolPSD
Binding site2454,2476
Score0.846
Seed1
Au0.324
Energy-19.9
Binding len22
Me-8.341
Phylopstem1.62074
Phylopflank4.022230911249999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure