Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTACAGCTCCATCAAGAATGAGAAGCTGCAGT
((((((((..(((((((((((&))))..)))))))...............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270966
GeneSymbolPSD
Binding site1809,1846
Score0.923
Seed1
Au0.441
Energy-19.7
Binding len37
Me-6.236
Phylopstem4.315738230769231
Phylopflank4.809571227499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure