Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCATCCTCAAGAACAATGGTGTCCTCCCTGCCCAGCTGCAT
.((((((((.(((.(..(((.&.)))..).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270974
GeneSymbolHYDIN
Binding site10701,10747
Score0.846
Seed1
Au0.471
Energy-22.4
Binding len20
Me-6.126
Phylopstem4.898871000000001
Phylopflank2.66010767375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure