Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGCTGACTGTGAGCTGCC
..((((((((((((((..(((&)))..)).)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270974
GeneSymbolHYDIN
Binding site15463,15485
Score0.846
Seed1
Au0.426
Energy-20.0
Binding len22
Me-4.957
Phylopstem2.5632614312500004
Phylopflank2.3343671512499995
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure