Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGCAACTGGCTCCTGGCAGCTGTG
..((((((((((((((..(((&)))...))))))........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270975
GeneSymbolIST1
Binding site1377,1406
Score0.846
Seed1
Au0.412
Energy-20.5
Binding len29
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure