Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACTGCTGTCGTGGCTGCT
..((((((((((..(((.(((&)))...)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270979
GeneSymbolIST1
Binding site2514,2536
Score0.846
Seed1
Au0.485
Energy-20.6
Binding len22
Me-7.103
Phylopstem-0.35105952
Phylopflank0.2692360062500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure