Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCACGCTGTGCTGCAGA
(((((((.(((((((((((((&)))))))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271
GeneSymbolCHD2
Binding site8876,8898
Score0.846
Seed1
Au0.456
Energy-23.7
Binding len22
Me-6.251
Phylopstem-0.36378794999999997
Phylopflank0.008342135000000014
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure