Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATGACCAGTACAGCAGTGACCGAG
(((..((((((((((((((((&)))))))))))......)))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271
GeneSymbolCHD2
Binding site5665,5694
Score0.923
Seed0
Au0.485
Energy-19.9
Binding len29
Me-11.089
Phylopstem4.319267045454546
Phylopflank4.103755585
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure