Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTTCCACCAACACCAGCTGTAT
.((((((((..((((..((((&)))).......))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271
GeneSymbolCHD2
Binding site2145,2171
Score0.846
Seed1
Au0.515
Energy-19.3
Binding len26
Me-8.094
Phylopstem5.6484430875
Phylopflank5.779783017500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure