Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCTTCCGCAGCTGCT
..((((((((((..(((....&.)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271006
GeneSymbolCENPX
Binding site200,250
Score0.923
Seed1
Au0.368
Energy-25.8
Binding len17
Me-7.103
Phylopstem-0.15185341
Phylopflank-0.5389761600000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure