Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGGGCCATGGGAAGAAACCATTGTGTGGCAGGG
.((((.(((((((((.......&.))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271023
GeneSymbolATRIP
Binding site2815,2850
Score0.923
Seed0
Au0.397
Energy-21.2
Binding len16
Me-5.927
Phylopstem0.9986954444444446
Phylopflank0.5484993075
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end1
Position3UTR
2D Structure