Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCCTGCAGCCAGCGAG
((((.(((((((((((.((((&))))))))))..)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271023
GeneSymbolATRIP
Binding site3852,3876
Score1.0
Seed0
Au0.324
Energy-23.8
Binding len24
Me-8.057
Phylopstem1.0957901538461539
Phylopflank1.9961756399999995
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure