Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTTACACTGCCAGGCCCTGCAGGACTTGGCAGCTGCT
..((((((((.((((((.(((&.))).)))))....).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271023
GeneSymbolATRIP
Binding site1431,1470
Score0.846
Seed1
Au0.368
Energy-23.2
Binding len25
Me-7.782
Phylopstem2.658696125
Phylopflank1.48267275075
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure