Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGCGGCCAGCACTGCC
..((((.(((((((((.((((&)))).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271023
GeneSymbolATRIP
Binding site44,64
Score0.846
Seed0
Au0.471
Energy-22.2
Binding len20
Me-6.501
Phylopstem-0.7574807
Phylopflank-0.11311346334615385
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure