Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCATGTAAAATACAACTGTGACATTCCAGGAGCTGCAGA
(((((((((((((((((((((&))))..........)))))))))...........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271033
GeneSymbolNEDD9
Binding site526,569
Score1.0
Seed1
Au0.485
Energy-21.9
Binding len43
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure