Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGCAGCCGCCGCTGCC
..(((((.((((((((..(((&)))..)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271044
GeneSymbolNFIX
Binding site2432,2452
Score1.0
Seed0
Au0.279
Energy-26.7
Binding len20
Me-7.271
Phylopstem0.8624083625
Phylopflank0.7217628262500001
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure