Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCTAGGGGAACCCCACCCTCCACACAGCCGGAGCTGCC
..((((((.(((((((..((.&.))..))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271044
GeneSymbolNFIX
Binding site1810,1852
Score0.923
Seed1
Au0.353
Energy-26.3
Binding len20
Me-6.013
Phylopstem0.47533841428571433
Phylopflank0.3029304212499999
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure