Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAGTGCAGCTGCC
..(((((((((..(((((((.&))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271049
GeneSymbolCFAP221
Binding site653,671
Score0.846
Seed1
Au0.632
Energy-23.9
Binding len18
Me-9.593
Phylopstem4.253736444444445
Phylopflank2.3935114825
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure