Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGGCCTCCCACCTGCCGCTGCTGTGGCAGCTGCT
..((((((((.(..(((.(((&.)))..)))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271096
GeneSymbolPUF60
Binding site899,939
Score0.846
Seed1
Au0.338
Energy-22.7
Binding len22
Me-9.928
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure