Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCATACCACACAGCCATAGGCTGCAGT
((((((((..((((((..(((&.)))..))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271146
GeneSymbolST3GAL6
Binding site3039,3068
Score0.897
Seed1
Au0.544
Energy-23.5
Binding len24
Me-6.236
Phylopstem-0.4600632
Phylopflank-0.312940565
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure