Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATTGGCAGCCCGCACTCGGCAGCTGCT
..(((((((((((((((((((&)))))....))))))........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271161
GeneSymbolPGR
Binding site932,964
Score0.923
Seed1
Au0.368
Energy-25.7
Binding len32
Me-4.957
Phylopstem-0.13732047000000003
Phylopflank0.020562479374999942
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure