Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCGCAGCCGCAGCCACTCAAGTGCC
..((((((((((((((..(((&)))...)))))))))))........))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271162
GeneSymbolPGR
Binding site351,380
Score0.923
Seed1
Au0.412
Energy-24.5
Binding len29
Me-4.957
Phylopstem-0.14685900000000005
Phylopflank-0.11874343887499998
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end6
Position5UTR
2D Structure