Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCTGCTCTTGCAGTTGCT
..((((((((((..(((.((.&)).)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271164
GeneSymbolPTGS1
Binding site3635,3654
Score0.821
Seed1
Au0.471
Energy-19.9
Binding len19
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure