Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTACTATGTGCCAGT
..((((((((....((((((..&))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271165
GeneSymbolPTGS1
Binding site3225,3242
Score0.846
Seed1
Au0.574
Energy-15.4
Binding len17
Me-13.275
Phylopstem-0.19215706249999998
Phylopflank0.12592748625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure