Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGGAAGTCCAGCAGCTGCT
..((((((((((((.(.((((&)))).).))..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271168
GeneSymbolPCED1A
Binding site373,396
Score0.923
Seed1
Au0.426
Energy-21.4
Binding len23
Me-5.692
Phylopstem1.1777978666666666
Phylopflank1.15581761875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure