Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAACCTGGGTTGCAGA
((((((((..(((((((((((&)))))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271186
GeneSymbolRAP2C
Binding site1450,1472
Score0.923
Seed1
Au0.559
Energy-26.1
Binding len22
Me-6.236
Phylopstem1.4258646454545454
Phylopflank3.292933162499999
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure