Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCACCGCCTGGGCAGAGGTGTGGCCACCCCAGCTGCAGG
(((((((((((((..(((((.&)))))..))))).......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271197
GeneSymbolCLEC18A
Binding site388,432
Score0.846
Seed1
Au0.279
Energy-23.1
Binding len44
Me-5.53
Phylopstem3.0447508888888897
Phylopflank2.3100375399999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure