Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCAGTAGTGCCAGT
..(((((((....((((.((..&)).))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271282
GeneSymbolDICER1
Binding site6413,6431
Score0.846
Seed1
Au0.544
Energy-15.5
Binding len18
Me-13.66
Phylopstem2.065061857142857
Phylopflank3.9994237249999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure