Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAACCCCTCAGCATGGCAGGCCTGCAGC
(((((((((((((((((((((&)))))))))))..........))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271282
GeneSymbolDICER1
Binding site236,270
Score0.923
Seed1
Au0.382
Energy-23.7
Binding len34
Me-3.938
Phylopstem1.809878878787878
Phylopflank1.1927588999999998
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end8
PositionCDS
2D Structure