Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGCTGCAGCTGTT
..((((((((((((((.....&))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271282
GeneSymbolDICER1
Binding site10100,10116
Score0.846
Seed1
Au0.691
Energy-20.9
Binding len16
Me-4.957
Phylopstem-0.07633076666666666
Phylopflank1.6389611437499993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure