Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTGGGCAGCCGGCTGCAGG
(((((((..(((((((..(((&)))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271440
GeneSymbolCFAP410
Binding site904,926
Score0.923
Seed1
Au0.294
Energy-21.5
Binding len22
Me-7.308
Phylopstem-0.1289539014285714
Phylopflank-0.43701568550000003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure