Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCGGCCGCCATGAAGCTGA
...(((((((((((((.((((&))))..)))))))).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271441
GeneSymbolCFAP410
Binding site181,206
Score0.846
Seed0
Au0.265
Energy-23.2
Binding len25
Me-6.515
Phylopstem-1.1842931444444444
Phylopflank-1.089116518875
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
Position5UTR
2D Structure