Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGCCACCGTCACCAGAGCCAGCTGCAGC
(((((((((((((.(((.(((&))).))).))))..........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271441
GeneSymbolCFAP410
Binding site2318,2350
Score0.846
Seed1
Au0.294
Energy-23.2
Binding len32
Me-4.794
Phylopstem1.8405403813043477
Phylopflank2.0984053935
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure