Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTCAGACCCAGTTGCAC
.((((((((.((((..(((((&)))))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271458
GeneSymbolCOLCA2
Binding site160,181
Score0.923
Seed1
Au0.456
Energy-22.7
Binding len21
Me-6.004
Phylopstem0.1558526375
Phylopflank1.46591689125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure