Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACACGCCCAGTACAGCTGCT
..(((((((.((((((.(((.&))).))).))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271458
GeneSymbolCOLCA2
Binding site589,613
Score0.846
Seed1
Au0.412
Energy-18.9
Binding len24
Me-6.2
Phylopstem0.5950113714285715
Phylopflank0.6160344912499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure