Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAAACCCAGCTGCAGA
(((((((((.((((((.....&)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271519
GeneSymbolKCNMA1
Binding site4885,4902
Score0.923
Seed1
Au0.515
Energy-20.7
Binding len17
Me-5.18
Phylopstem8.140175555555556
Phylopflank6.877255529999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure