Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTGCGGGGGCAAGACGAAGGGTTGTTGGCGGCTGCGGCTGGGGC
((.(((((((((((((.....&.))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271520
GeneSymbolKCNMA1
Binding site521,569
Score0.846
Seed0
Au0.265
Energy-23.3
Binding len18
Me-5.495
Phylopstem0.39919292307692306
Phylopflank-0.13560089999999997
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end3
PositionCDS
2D Structure