Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCTAGGA
.((((((((((...........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271562
GeneSymbolC11orf71
Binding site1874,1885
Score1.0
Seed1
Au0.662
Energy-17.3
Binding len11
Me-10.255
Phylopstem-0.43364720000000007
Phylopflank-0.57980218625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure