Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTTCCAGCTGCC
..(((((((.((..(.(((((&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271593
GeneSymbolPPME1
Binding site2273,2290
Score0.846
Seed1
Au0.412
Energy-17.6
Binding len17
Me-8.579
Phylopstem0.6246001
Phylopflank0.7622152263749998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure