Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAACAGCCGTAGCA
.....(((((((((((..(((&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271610
GeneSymbolSTX10
Binding site524,541
Score0.962
Seed0
Au0.559
Energy-22.9
Binding len17
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure