Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCCCTGCACGTGGCTGCT
..(((((((((((.(((((((&)))).)))...)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271618
GeneSymbolPPP1R12C
Binding site775,799
Score0.846
Seed1
Au0.353
Energy-21.8
Binding len24
Me-5.814
Phylopstem0.638215175
Phylopflank0.9605302012499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure