Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCACCCATGCTGTG
..(((((((.((.((((((((&)))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271634
GeneSymbolCNOT9
Binding site267,286
Score0.833
Seed1
Au0.529
Energy-21.5
Binding len19
Me-7.489
Phylopstem6.509476
Phylopflank6.07373907
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure