Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGTCGACTGGCACTGTTTACAAGTCTGTTAGCTGCAT
.((((((((((((((((((((&)))))).))))))...................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271634
GeneSymbolCNOT9
Binding site1651,1692
Score0.846
Seed1
Au0.588
Energy-19.7
Binding len41
Me-3.793
Phylopstem2.373609675
Phylopflank1.9011496612499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure